Did you mean to link a different article, that one doesn't say anything about defense industry ties (from my quick skim). It does talk about how phone numbers are no longer required when connecting to someone else.
Signal DOES have my phone number, but they can't tell my government anything other than
- yes I use Signal
- yes I connected to it today
This becomes even less important as the platform gets popular. I know some friends who work in healthcare that report that they're switching to Signal (and WhatsApp unfortunately) as an alternative to texting/phone calls for staff/department group chats and non-patient related communications.